DNase-seq_ENCSR792QQE
DNase-seq ENCSR792QQE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)"]
×
| Id: | DNase-seq/ENCSR792QQE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR792QQE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (54 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF153KXN|/files/ENCFF153KXN/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.33. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR792QQE | float |
DNase-seq_ENCSR792QQE |
DNase-seq ENCSR792QQE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)"]
|
|
[0.0517, 19] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF273NKF.bed.gz | 1.06 MB | a947beefbe02d027e02a7962362abc53 |
| ENCFF273NKF.bed.gz.dvc | 101.0 B | 5ec599468c14ca1501ab1f7a0ffd2866 |
| ENCFF273NKF.tabix.bed.gz | 995.46 KB | 7cf23ee02ee358af8597754955137beb |
| ENCFF273NKF.tabix.bed.gz.dvc | 107.0 B | 280007585d5268471b83c6875e9f7b8d |
| ENCFF273NKF.tabix.bed.gz.tbi | 376.17 KB | cfa3a1b75dc4078955c270d3a337ce33 |
| ENCFF273NKF.tabix.bed.gz.tbi.dvc | 110.0 B | faf326321dbcd02bee89b28dd5e3e2ef |
| genomic_resource.yaml | 2.06 KB | 0b3581e92486c86f4f4b9a3a016d5401 |
| genomic_resource_original.yaml | 1.95 KB | ef92aa3ad87f8e9bf963780ff135ba00 |
| statistics/ |