Resource

Id DNase-seq/ENCSR792QQEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR792QQE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)"]
Description
Labels
  • accession: ENCSR792QQE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (54 years)
  • date_created: 2019-09-12T18:22:17.969310+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR792QQE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR792QQE float

DNase-seq_ENCSR792QQE
DNase-seq ENCSR792QQE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR792QQE [0.0517, 19]
n
19,126,418
mean
1.57
sd
1.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 191264180.59% 99371
chr1 1843418 0.74% 9548
chr2 1570755 0.65% 8182
chr3 1144180 0.58% 6018
chr4 668997 0.35% 3549
chr5 964055 0.53% 5029
chr6 975530 0.57% 5116
chr7 890430 0.56% 4667
chr8 766222 0.53% 4094
chr9 852707 0.62% 4461
chr10 1000507 0.75% 5243
chr11 1073011 0.79% 5508
chr12 884995 0.66% 4567
chr13 389570 0.34% 2095
chr14 607749 0.57% 3153
chr15 719518 0.71% 3749
chr16 699112 0.77% 3526
chr17 978538 1.18% 4945
chr18 350700 0.44% 1903
chr19 941967 1.61% 4581
chr20 594746 0.92% 3088
chr21 253487 0.54% 1307
chr22 471609 0.93% 2430
chrX 466744 0.30% 2517
chrY 17871 0.03% 95
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99371 1 1000 192.47 183
global segment-length histogram

Files

Filename Size md5
ENCFF273NKF.bed.gz 1.06 MB a947beefbe02d027e02a7962362abc53
ENCFF273NKF.tabix.bed.gz 995.46 KB 7cf23ee02ee358af8597754955137beb
ENCFF273NKF.tabix.bed.gz.tbi 376.17 KB cfa3a1b75dc4078955c270d3a337ce33
genomic_resource.yaml 2.06 KB 0b3581e92486c86f4f4b9a3a016d5401
statistics/