DNase-seq_ENCSR785RIM
DNase-seq ENCSR785RIM [biosample_summary="Homo sapiens T-cell male adult (49 years)"]
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| Id: | DNase-seq/ENCSR785RIM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR785RIM [biosample_summary="Homo sapiens T-cell male adult (49 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (49 years) output_type: peaks audit_warning: Alignment file {ENCFF427ZCV|/files/ENCFF427ZCV/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 43178290 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR785RIM | float |
DNase-seq_ENCSR785RIM |
DNase-seq ENCSR785RIM [biosample_summary="Homo sapiens T-cell male adult (49 years)"]
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[0.186, 136] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF025ORJ.bed.gz | 570.54 KB | dad875f5cf353bcb4db62f7c39e5ac1e |
| ENCFF025ORJ.bed.gz.dvc | 100.0 B | f8f415c50959af81db4ff3ad82e10877 |
| ENCFF025ORJ.tabix.bed.gz | 516.5 KB | e1a05a3789d310e4f3930df2ff86e3d7 |
| ENCFF025ORJ.tabix.bed.gz.dvc | 106.0 B | 283ef465bf93bbdbac0f67ee59407b5b |
| ENCFF025ORJ.tabix.bed.gz.tbi | 241.37 KB | a8c36e635e8fc91df8d3795a98733c87 |
| ENCFF025ORJ.tabix.bed.gz.tbi.dvc | 110.0 B | 66717e48440be2c8ba6d7310a3337ee3 |
| genomic_resource.yaml | 1.79 KB | 9473d597e15d486215ff5cd376655ac1 |
| genomic_resource_original.yaml | 1.7 KB | 45bf35350f0cf6d02a4aa52806b9ba5b |
| statistics/ |