Resource
| Id | DNase-seq/ENCSR785MXI |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR785MXI [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (88 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (88 years) with mild cognitive impairment output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR785MXI | float |
DNase-seq_ENCSR785MXI |
DNase-seq ENCSR785MXI [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (88 years)"]
|
![]() |
[0.0695, 21.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 17075145 | 0.53% | 89168 |
| chr1 | 1660834 | 0.67% | 8557 |
| chr2 | 1222986 | 0.50% | 6479 |
| chr3 | 992823 | 0.50% | 5209 |
| chr4 | 657096 | 0.35% | 3416 |
| chr5 | 882276 | 0.49% | 4630 |
| chr6 | 901669 | 0.53% | 4701 |
| chr7 | 887537 | 0.56% | 4669 |
| chr8 | 736522 | 0.51% | 3870 |
| chr9 | 780599 | 0.56% | 4076 |
| chr10 | 749719 | 0.56% | 3980 |
| chr11 | 960963 | 0.71% | 5014 |
| chr12 | 831679 | 0.62% | 4291 |
| chr13 | 375449 | 0.33% | 1996 |
| chr14 | 554841 | 0.52% | 2872 |
| chr15 | 578352 | 0.57% | 2989 |
| chr16 | 680134 | 0.75% | 3528 |
| chr17 | 940288 | 1.13% | 4863 |
| chr18 | 340833 | 0.42% | 1836 |
| chr19 | 817192 | 1.39% | 4145 |
| chr20 | 504455 | 0.78% | 2700 |
| chr21 | 171455 | 0.37% | 895 |
| chr22 | 437909 | 0.86% | 2311 |
| chrX | 409272 | 0.26% | 2139 |
| chrY | 262 | <0.01% | 2 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 89168 | 1 | 800 | 191.49 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF863YIN.bed.gz | 985.39 KB | a6646cc7312cc237818a73274d904a6d |
| ENCFF863YIN.tabix.bed.gz | 901.49 KB | fd27ef5e9dc10e4db21a3196e1ca4256 |
| ENCFF863YIN.tabix.bed.gz.tbi | 346.54 KB | b3e921d4642b0b57abed35b1ebb5c55f |
| genomic_resource.yaml | 1.44 KB | dd5b6cbce62ccbc812e7d02870b3fe89 |
| statistics/ |
