DNase-seq_ENCSR762FCX
DNase-seq ENCSR762FCX [biosample_summary="Homo sapiens large intestine tissue male embryo (91 days)"]
×
| Id: | DNase-seq/ENCSR762FCX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR762FCX [biosample_summary="Homo sapiens large intestine tissue male embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF891VBB|/files/ENCFF891VBB/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 20856794 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR762FCX | float |
DNase-seq_ENCSR762FCX |
DNase-seq ENCSR762FCX [biosample_summary="Homo sapiens large intestine tissue male embryo (91 days)"]
|
|
[0.385, 15.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF069ANX.bed.gz | 349.7 KB | 4e0c9ed04bdeb64d5e3e116999ae6e71 |
| ENCFF069ANX.bed.gz.dvc | 100.0 B | f4272dbf3886187dda1d269f0d8a08f5 |
| ENCFF069ANX.tabix.bed.gz | 313.31 KB | 880b02de9f3b0e343a021fb497d0c478 |
| ENCFF069ANX.tabix.bed.gz.dvc | 106.0 B | 7125fff877ebb346fe5c441236c80609 |
| ENCFF069ANX.tabix.bed.gz.tbi | 192.24 KB | 6d9522317b0c8f7dca18e3123a983bb3 |
| ENCFF069ANX.tabix.bed.gz.tbi.dvc | 110.0 B | b880386fe9972f267ad1eb07cac0e248 |
| genomic_resource.yaml | 1.84 KB | 15f045d692a73d1ea0d5900d49fd727c |
| genomic_resource_original.yaml | 1.74 KB | 064b2e77859ba2f2d9244107c48bb2ef |
| statistics/ |