DNase-seq_ENCSR757EPJ
DNase-seq ENCSR757EPJ [biosample_summary="Homo sapiens kidney tissue male embryo (85 days)"]
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| Id: | DNase-seq/ENCSR757EPJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR757EPJ [biosample_summary="Homo sapiens kidney tissue male embryo (85 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (85 days) output_type: peaks audit_warning: Alignment file {ENCFF283QOO|/files/ENCFF283QOO/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 43096738 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR757EPJ | float |
DNase-seq_ENCSR757EPJ |
DNase-seq ENCSR757EPJ [biosample_summary="Homo sapiens kidney tissue male embryo (85 days)"]
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[0.163, 31.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF989JWT.bed.gz | 1002.83 KB | b0408799f0fabf8f471cf5fde52815d3 |
| ENCFF989JWT.bed.gz.dvc | 101.0 B | ca1edd26c94a46efe9ea1a5a4008a4da |
| ENCFF989JWT.tabix.bed.gz | 901.36 KB | e1d9c7de26722a475b9b0da42b4a5a85 |
| ENCFF989JWT.tabix.bed.gz.dvc | 106.0 B | 4281b37e957dba0b409796887c4d0c0b |
| ENCFF989JWT.tabix.bed.gz.tbi | 452.38 KB | a5e161ba2ea6cdf16d9e0a67305a8d7c |
| ENCFF989JWT.tabix.bed.gz.tbi.dvc | 110.0 B | 850727da8eb847c308ce1eeb03e3f9fa |
| genomic_resource.yaml | 1.81 KB | f0c8bfea21d62bb60cea115c427b9c62 |
| genomic_resource_original.yaml | 1.72 KB | f7dabb6403ee242a1b293f3a1b9315da |
| statistics/ |