DNase-seq_ENCSR744UQK
DNase-seq ENCSR744UQK [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
×
| Id: | DNase-seq/ENCSR744UQK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR744UQK [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_warning: Alignment file {ENCFF475JUX|/files/ENCFF475JUX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39304544 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR744UQK | float |
DNase-seq_ENCSR744UQK |
DNase-seq ENCSR744UQK [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
|
|
[0.23, 63.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF106XUY.bed.gz | 467.09 KB | a5570e90b1838c739e52d9a166779be0 |
| ENCFF106XUY.bed.gz.dvc | 100.0 B | ed4233c88ea462743cc514461aaf9339 |
| ENCFF106XUY.tabix.bed.gz | 424.99 KB | df33b82be40271235be3208daf40c0e3 |
| ENCFF106XUY.tabix.bed.gz.dvc | 106.0 B | 7f71866f2c3788583c7b5b73736deaaa |
| ENCFF106XUY.tabix.bed.gz.tbi | 213.75 KB | 553e0aa7070cfa48144014d8baaa610d |
| ENCFF106XUY.tabix.bed.gz.tbi.dvc | 110.0 B | 1bf6e6e55ac328dbb98b336dcc00b7eb |
| genomic_resource.yaml | 1.88 KB | 0b5689bed4b75c95b1c9c22543797518 |
| genomic_resource_original.yaml | 1.77 KB | c3952e3464268e38ce93ce0e8c2b9c85 |
| statistics/ |