Resource

Id DNase-seq/ENCSR735NTVcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR735NTV [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)"]
Description
Labels
  • accession: ENCSR735NTV
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (54 years)
  • date_created: 2019-09-12T18:22:17.834676+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR735NTV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR735NTV float

DNase-seq_ENCSR735NTV
DNase-seq ENCSR735NTV [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR735NTV [0.0395, 16.6]
n
29,209,657
mean
0.994
sd
1.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 292096570.91% 143432
chr1 2596820 1.04% 12566
chr2 2725856 1.13% 13459
chr3 1798840 0.91% 8780
chr4 890778 0.47% 4502
chr5 1515586 0.83% 7394
chr6 1467814 0.86% 7323
chr7 1319475 0.83% 6615
chr8 1290771 0.89% 6423
chr9 1311693 0.95% 6403
chr10 1921162 1.44% 9478
chr11 1643900 1.22% 7888
chr12 1195954 0.90% 5864
chr13 638364 0.56% 3247
chr14 928301 0.87% 4523
chr15 1190754 1.17% 5870
chr16 992152 1.10% 4842
chr17 1263398 1.52% 6114
chr18 687871 0.86% 3490
chr19 1188823 2.03% 5663
chr20 958841 1.49% 4716
chr21 467419 1.00% 2293
chr22 724067 1.42% 3497
chrX 473035 0.30% 2389
chrY 17983 0.03% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 143432 1 1160 203.65 200
global segment-length histogram

Files

Filename Size md5
ENCFF458QDV.bed.gz 1.46 MB 264e3f23050050af1544733e45bd8f94
ENCFF458QDV.tabix.bed.gz 1.35 MB 997aee126bd2a44e9d3529086c78b57e
ENCFF458QDV.tabix.bed.gz.tbi 373.35 KB 3bfeff628734fe534129cc8493620fed
genomic_resource.yaml 2.06 KB 43c69089e157ad53fe17c22d62e1065c
statistics/