DNase-seq_ENCSR735BIM
DNase-seq ENCSR735BIM [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)"]
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| Id: | DNase-seq/ENCSR735BIM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR735BIM [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (43 years) output_type: peaks audit_warning: Alignment file {ENCFF062ZPB|/files/ENCFF062ZPB/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 24196952 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR735BIM | float |
DNase-seq_ENCSR735BIM |
DNase-seq ENCSR735BIM [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)"]
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[0.207, 52.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF752XGR.bed.gz | 632.73 KB | 3f80bf4ef8fc54b1ae784ca34520fac1 |
| ENCFF752XGR.bed.gz.dvc | 100.0 B | 6084b13b3ff621ab7dec8110b59b4cce |
| ENCFF752XGR.tabix.bed.gz | 563.87 KB | 6da18caa7f21ef7780b0477b7c7edfb5 |
| ENCFF752XGR.tabix.bed.gz.dvc | 106.0 B | 38ae9228b69740e4c82f43bfd9fe0b52 |
| ENCFF752XGR.tabix.bed.gz.tbi | 327.23 KB | 7875a42a73bd4c1b2f1a9cf88cdd3096 |
| ENCFF752XGR.tabix.bed.gz.tbi.dvc | 110.0 B | 7efc561c94362814b213772d01c7109c |
| genomic_resource.yaml | 1.9 KB | a136576559c2d2379ae6aa7929adfadf |
| genomic_resource_original.yaml | 1.78 KB | 993de851f15a4b11fe9250cce90d0ee4 |
| statistics/ |