DNase-seq_ENCSR715TMH
DNase-seq ENCSR715TMH [biosample_summary="Homo sapiens T-cell female adult (32 years)"]
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| Id: | DNase-seq/ENCSR715TMH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR715TMH [biosample_summary="Homo sapiens T-cell female adult (32 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (32 years) output_type: peaks audit_warning: Alignment file {ENCFF423ZPD|/files/ENCFF423ZPD/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39037420 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR715TMH | float |
DNase-seq_ENCSR715TMH |
DNase-seq ENCSR715TMH [biosample_summary="Homo sapiens T-cell female adult (32 years)"]
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[0.205, 124] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF220XPZ.bed.gz | 562.72 KB | dc0c207a2a9f56a63c8e78e87fb8e5e7 |
| ENCFF220XPZ.bed.gz.dvc | 100.0 B | e15ad534ea84b82ea100aa4d86d386b2 |
| ENCFF220XPZ.tabix.bed.gz | 510.95 KB | f68fefb4ef6f2b5b11011020f3e145c8 |
| ENCFF220XPZ.tabix.bed.gz.dvc | 106.0 B | def91e8f82313e69f7f579ad3b732cdc |
| ENCFF220XPZ.tabix.bed.gz.tbi | 241.07 KB | c48c337fbeced23b19bc615d6a80d3fb |
| ENCFF220XPZ.tabix.bed.gz.tbi.dvc | 110.0 B | aeed941acf2741fc05c99443f7914213 |
| genomic_resource.yaml | 1.8 KB | 759ba48229ec40cf24109c42af59decf |
| genomic_resource_original.yaml | 1.71 KB | beda7de126e2b7bee362748e09693d67 |
| statistics/ |