DNase-seq_ENCSR697FME
DNase-seq ENCSR697FME [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR697FME |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR697FME [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF859NRU|/files/ENCFF859NRU/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 42721396 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR697FME | float |
DNase-seq_ENCSR697FME |
DNase-seq ENCSR697FME [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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[0.281, 107] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF632GSK.bed.gz | 492.29 KB | 30f8735107d55df749cf2d257def8336 |
| ENCFF632GSK.bed.gz.dvc | 100.0 B | 55ea4e77bfadb2e668b53ccd9ad609c7 |
| ENCFF632GSK.tabix.bed.gz | 445.42 KB | b77ae53b4f1ffa4af57ced1bfeb4fbce |
| ENCFF632GSK.tabix.bed.gz.dvc | 106.0 B | b14a15827a0280f316dc473c47a026a9 |
| ENCFF632GSK.tabix.bed.gz.tbi | 217.7 KB | 1ca6bc9484846a03a83637d95ae142df |
| ENCFF632GSK.tabix.bed.gz.tbi.dvc | 110.0 B | 2f64dc92ad89683c96ba175ff94197f2 |
| genomic_resource.yaml | 1.87 KB | e3c2617020476d5f1c86839e0aedb4fd |
| genomic_resource_original.yaml | 1.76 KB | 5ec6e38a99f73d7b660c9bf69e6a368b |
| statistics/ |