Resource

Id DNase-seq/ENCSR696XSJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR696XSJ [biosample_summary="Homo sapiens adrenal gland tissue female embryo (113 days)"]
Description
Labels
  • accession: ENCSR696XSJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female embryo (113 days)
  • date_created: 2015-09-16T21:43:00.488820+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR696XSJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (113 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR696XSJ float

DNase-seq_ENCSR696XSJ
DNase-seq ENCSR696XSJ [biosample_summary="Homo sapiens adrenal gland tissue female embryo (113 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR696XSJ [4, 2.34e+03]
n
16,437,760
mean
54.2
sd
59.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 164377600.51% 109362
chr1 1447163 0.58% 9628
chr2 1344447 0.56% 8936
chr3 1099338 0.55% 7317
chr4 903262 0.47% 6002
chr5 964665 0.53% 6418
chr6 978197 0.57% 6508
chr7 872841 0.55% 5812
chr8 792772 0.55% 5272
chr9 691462 0.50% 4601
chr10 775587 0.58% 5162
chr11 827232 0.61% 5505
chr12 798554 0.60% 5311
chr13 499219 0.44% 3323
chr14 526007 0.49% 3499
chr15 505800 0.50% 3369
chr16 514801 0.57% 3420
chr17 609961 0.73% 4060
chr18 394842 0.49% 2625
chr19 506227 0.86% 3373
chr20 416633 0.65% 2772
chr21 201072 0.43% 1339
chr22 269100 0.53% 1792
chrX 497528 0.32% 3311
chrY 1050 <0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 109362 21 450 150.31 150
global segment-length histogram

Files

Filename Size md5
ENCFF094AUJ.bed.gz 1.04 MB c1c33737c519b9c77b090f79d6e06d83
ENCFF094AUJ.tabix.bed.gz 909.77 KB ec795cd921f22bd9823a041e81b97a4e
ENCFF094AUJ.tabix.bed.gz.tbi 523.95 KB aabcbafd693126f6737ad9f7f17dbbe3
genomic_resource.yaml 1.41 KB a57afe6b7c1f9820a20e206d4ef904c9
statistics/