DNase-seq_ENCSR694LFE
DNase-seq ENCSR694LFE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"]
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| Id: | DNase-seq/ENCSR694LFE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR694LFE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (61 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF671AXT|/files/ENCFF671AXT/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.33. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR694LFE | float |
DNase-seq_ENCSR694LFE |
DNase-seq ENCSR694LFE [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"]
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[0.0333, 19.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF627FIO.bed.gz | 1.61 MB | e73f0994bb0e7bbc29a77c511e89015e |
| ENCFF627FIO.bed.gz.dvc | 101.0 B | 660e68e686ba33ef7447b665aa472e4c |
| ENCFF627FIO.tabix.bed.gz | 1.51 MB | 6eee8b6aca4d59504412d15bfa4b714c |
| ENCFF627FIO.tabix.bed.gz.dvc | 107.0 B | 15d1a3ec6786144efcc407b80ab758e5 |
| ENCFF627FIO.tabix.bed.gz.tbi | 313.58 KB | 28f692c843572257492388d5f729f0f9 |
| ENCFF627FIO.tabix.bed.gz.tbi.dvc | 110.0 B | 6f5b023b5885176b4608d4f31cefa6e6 |
| genomic_resource.yaml | 2.06 KB | 98da255b27d15c58abdd6792d3c7964b |
| genomic_resource_original.yaml | 1.95 KB | f9402b842447cb808921201dba466cfe |
| statistics/ |