DNase-seq_ENCSR694DOX
DNase-seq ENCSR694DOX [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (83 years)"]
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| Id: | DNase-seq/ENCSR694DOX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR694DOX [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (83 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (83 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF515ADG|/files/ENCFF515ADG/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.39. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR694DOX | float |
DNase-seq_ENCSR694DOX |
DNase-seq ENCSR694DOX [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (83 years)"]
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[0.119, 18.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF099FUV.bed.gz | 479.59 KB | 4ca7955b4caddc2292e9564852eb927a |
| ENCFF099FUV.bed.gz.dvc | 100.0 B | 26f9042f05ef31c0d2ccda85370b9791 |
| ENCFF099FUV.tabix.bed.gz | 433.37 KB | 8f3ff23d5c142bbca587010580a0bc2d |
| ENCFF099FUV.tabix.bed.gz.dvc | 106.0 B | f1144b73feadc82d2dc7c30ab55e2d82 |
| ENCFF099FUV.tabix.bed.gz.tbi | 225.09 KB | 998fdad9b1e06772302dd5baf765d7b8 |
| ENCFF099FUV.tabix.bed.gz.tbi.dvc | 110.0 B | d01d763af93ffe0686ba0e1c4d311122 |
| genomic_resource.yaml | 2.08 KB | b72c38469f1d261a2e70beaa4c085720 |
| genomic_resource_original.yaml | 1.96 KB | afe9fbd11c96e9fc4c7609ba7ab27cda |
| statistics/ |