Resource

Id DNase-seq/ENCSR693UHTcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR693UHT [biosample_summary="Homo sapiens omental fat pad tissue female adult (51 years)"]
Description
Labels
  • accession: ENCSR693UHT
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0010414/
  • biosample_summary: Homo sapiens omental fat pad tissue female adult (51 years)
  • date_created: 2019-08-18T16:57:12.415860+00:00
  • date_released: 2019-11-08
  • doi: 10.17989/ENCSR693UHT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR693UHT float

DNase-seq_ENCSR693UHT

DNase-seq ENCSR693UHT [biosample_summary="Homo sapiens omental fat pad tissue female adult (51 years)"]
HISTOGRAM FOR DNase-seq_ENCSR693UHT [7, 1.51e+03]
n
1,421,563
mean
69.8
sd
38.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 14215630.04% 9452
chr1 152412 0.06% 1017
chr2 95448 0.04% 637
chr3 82073 0.04% 546
chr4 53670 0.03% 358
chr5 62652 0.03% 417
chr6 73938 0.04% 491
chr7 69773 0.04% 465
chr8 48435 0.03% 322
chr9 58438 0.04% 390
chr10 51750 0.04% 343
chr11 81801 0.06% 542
chr12 77314 0.06% 513
chr13 27150 0.02% 180
chr14 44550 0.04% 297
chr15 46154 0.05% 305
chr16 62896 0.07% 418
chr17 80363 0.10% 533
chr18 22950 0.03% 153
chr19 122939 0.21% 816
chr20 37050 0.06% 247
chr21 12130 0.03% 81
chr22 28727 0.06% 190
chrX 28350 0.02% 187
chrY 600 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9452 23 377 150.4 150
global segment-length histogram

Files

Filename Size md5
ENCFF188LZJ.bed.gz 99.44 KB 3635b5d6f504d70a271761731d25adbf
ENCFF188LZJ.tabix.bed.gz 83.05 KB 7568fcb266d4b7ebc36a10b3f47df189
ENCFF188LZJ.tabix.bed.gz.tbi 77.79 KB 29792f750dc7afc1e8770c1c48732652
genomic_resource.yaml 2.01 KB 648fd1381ada3d65ba70985de89e7ac1
statistics/