DNase-seq_ENCSR674JIL
DNase-seq ENCSR674JIL [biosample_summary="Homo sapiens CD14-positive monocyte male adult (37 years)"]
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| Id: | DNase-seq/ENCSR674JIL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR674JIL [biosample_summary="Homo sapiens CD14-positive monocyte male adult (37 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (37 years) output_type: peaks audit_warning: Alignment file {ENCFF939YUM|/files/ENCFF939YUM/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 22866551 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR674JIL | float |
DNase-seq_ENCSR674JIL |
DNase-seq ENCSR674JIL [biosample_summary="Homo sapiens CD14-positive monocyte male adult (37 years)"]
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[0.307, 38.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF469WRJ.bed.gz | 534.82 KB | 4088ae63ad0ddf085b6bd7fade778673 |
| ENCFF469WRJ.bed.gz.dvc | 100.0 B | f916c59ed185ccf6e41a92137cb5ec65 |
| ENCFF469WRJ.tabix.bed.gz | 478.71 KB | 9a6dcf175085dbca64c5112f21d69150 |
| ENCFF469WRJ.tabix.bed.gz.dvc | 106.0 B | 1558919850179f27152b1c6dd419689b |
| ENCFF469WRJ.tabix.bed.gz.tbi | 255.9 KB | fd35c54b9fdd710829aa4f19e94faab9 |
| ENCFF469WRJ.tabix.bed.gz.tbi.dvc | 110.0 B | 157f3ce5fec4514cc803376edb6ad726 |
| genomic_resource.yaml | 1.84 KB | a30a8218d6a0d28817355f989b3e8774 |
| genomic_resource_original.yaml | 1.74 KB | 3bc297d0d9339b74d263c76707e703e7 |
| statistics/ |