Resource

Id DNase-seq/ENCSR674JILcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR674JIL [biosample_summary="Homo sapiens CD14-positive monocyte male adult (37 years)"]
Description
Labels
  • accession: ENCSR674JIL
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte male adult (37 years)
  • date_created: 2015-09-16T21:42:11.072419+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR674JIL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR674JIL float

DNase-seq_ENCSR674JIL

DNase-seq ENCSR674JIL [biosample_summary="Homo sapiens CD14-positive monocyte male adult (37 years)"]
HISTOGRAM FOR DNase-seq_ENCSR674JIL [0.307, 38.2]
n
8,851,519
mean
4.69
sd
4.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 88515190.28% 49983
chr1 873554 0.35% 4926
chr2 691782 0.29% 3923
chr3 562639 0.28% 3191
chr4 374253 0.20% 2134
chr5 441373 0.24% 2496
chr6 547524 0.32% 3081
chr7 428451 0.27% 2427
chr8 380026 0.26% 2155
chr9 361389 0.26% 2043
chr10 413451 0.31% 2361
chr11 437578 0.32% 2461
chr12 469844 0.35% 2648
chr13 198139 0.17% 1137
chr14 285327 0.27% 1617
chr15 283870 0.28% 1640
chr16 301209 0.33% 1697
chr17 445439 0.54% 2495
chr18 170797 0.21% 977
chr19 421743 0.72% 2274
chr20 263650 0.41% 1486
chr21 113547 0.24% 635
chr22 176052 0.35% 1000
chrX 203536 0.13% 1139
chrY 6346 0.01% 40
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49983 10 660 177.09 180
global segment-length histogram

Files

Filename Size md5
ENCFF469WRJ.bed.gz 534.82 KB 4088ae63ad0ddf085b6bd7fade778673
ENCFF469WRJ.tabix.bed.gz 478.71 KB 9a6dcf175085dbca64c5112f21d69150
ENCFF469WRJ.tabix.bed.gz.tbi 255.9 KB fd35c54b9fdd710829aa4f19e94faab9
genomic_resource.yaml 1.84 KB a30a8218d6a0d28817355f989b3e8774
statistics/