Resource

Id DNase-seq/ENCSR672MOGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR672MOG [biosample_summary="Homo sapiens sciatic nerve tissue female adult (41 years)"]
Description
Labels
  • accession: ENCSR672MOG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001322/
  • biosample_summary: Homo sapiens sciatic nerve tissue female adult (41 years)
  • date_created: 2019-02-01T20:19:09.074926+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR672MOG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR672MOG float

DNase-seq_ENCSR672MOG
DNase-seq ENCSR672MOG [biosample_summary="Homo sapiens sciatic nerve tissue female adult (41 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR672MOG [0.0427, 22.9]
n
27,946,086
mean
1.05
sd
1.72

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 279460860.87% 137564
chr1 2559956 1.03% 12609
chr2 2489056 1.03% 12036
chr3 1309372 0.66% 6485
chr4 785768 0.41% 3845
chr5 1178133 0.65% 5826
chr6 1051492 0.62% 5278
chr7 1387657 0.87% 6859
chr8 1123846 0.77% 5501
chr9 1312086 0.95% 6412
chr10 1591049 1.19% 7831
chr11 1748087 1.29% 8432
chr12 1062710 0.80% 5383
chr13 519265 0.45% 2543
chr14 932780 0.87% 4617
chr15 1077630 1.06% 5359
chr16 1153030 1.28% 5854
chr17 1769248 2.13% 8716
chr18 472983 0.59% 2340
chr19 1201272 2.05% 5918
chr20 958535 1.49% 4828
chr21 561632 1.20% 2682
chr22 1135517 2.23% 5350
chrX 563389 0.36% 2847
chrY 1593 <0.01% 13
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 137564 1 1440 203.15 185
global segment-length histogram

Files

Filename Size md5
ENCFF552QBG.bed.gz 1.36 MB fd43ed9717049f717e88879f2d19c6a9
ENCFF552QBG.tabix.bed.gz 1.28 MB b23ba1ba8f557a40405a25b64b20e25d
ENCFF552QBG.tabix.bed.gz.tbi 278.1 KB 22d62e320416406bac4feee79b632ae2
genomic_resource.yaml 2.05 KB 3e702aed376b0fbdc794288e2d390804
statistics/