| Id: | DNase-seq/ENCSR671ZRV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR671ZRV [biosample_summary="Homo sapiens central memory CD4-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF449DWJ|/files/ENCFF449DWJ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 40243914 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR671ZRV | float |
DNase-seq_ENCSR671ZRV |
DNase-seq ENCSR671ZRV [biosample_summary="Homo sapiens central memory CD4-positive, alpha-beta T cell male adult (38 years)"]
|
![]() |
[0.274, 50.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF358END.bed.gz | 488.2 KB | fd8b70acab13c4f543d6c614a82dfb20 |
| ENCFF358END.bed.gz.dvc | 100.0 B | 42315b789ca45f6b486e1b8c6d4f941e |
| ENCFF358END.tabix.bed.gz | 442.32 KB | 71e3b3f5bea30bedc8dddd0ff1090f6c |
| ENCFF358END.tabix.bed.gz.dvc | 106.0 B | b025950fef6f0335ddb6cf0f750451ea |
| ENCFF358END.tabix.bed.gz.tbi | 225.19 KB | a3572bb27f208ace284c3d3335e68197 |
| ENCFF358END.tabix.bed.gz.tbi.dvc | 110.0 B | eb26ddfffea295094fc82d298be86d0f |
| genomic_resource.yaml | 1.92 KB | fbfb2c15b768306236e3ff7424753e60 |
| genomic_resource_original.yaml | 1.79 KB | fb41004d695ffca2dd5a78414d12d07d |
| statistics/ |