DNase-seq_ENCSR654WXX
DNase-seq ENCSR654WXX [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"]
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| Id: | DNase-seq/ENCSR654WXX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR654WXX [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_warning: Alignment file {ENCFF798CVZ|/files/ENCFF798CVZ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 21152336 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR654WXX | float |
DNase-seq_ENCSR654WXX |
DNase-seq ENCSR654WXX [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"]
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[0.379, 91.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF314VZJ.bed.gz | 383.51 KB | 3ddf833827f1cfff05c8557605123f49 |
| ENCFF314VZJ.bed.gz.dvc | 100.0 B | f4cbda06a910c8c30a5a5834534d79ec |
| ENCFF314VZJ.tabix.bed.gz | 347.69 KB | 1ba09c08a05cd0424de79614c3fc9d90 |
| ENCFF314VZJ.tabix.bed.gz.dvc | 106.0 B | 956f0b708ae340a10732d086c01590cb |
| ENCFF314VZJ.tabix.bed.gz.tbi | 192.93 KB | a5700d4e32d6daf23919206ad6cabf8f |
| ENCFF314VZJ.tabix.bed.gz.tbi.dvc | 110.0 B | f221838ee8631d8517c346a2964c71bd |
| genomic_resource.yaml | 1.88 KB | 4414f294b58e831a08d42a030e934df2 |
| genomic_resource_original.yaml | 1.77 KB | d22c9c7440e85ef593814f4f7fef286f |
| statistics/ |