DNase-seq_ENCSR649PJN
DNase-seq ENCSR649PJN [biosample_summary="Homo sapiens muscle of arm tissue male embryo (97 days)"]
×
| Id: | DNase-seq/ENCSR649PJN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR649PJN [biosample_summary="Homo sapiens muscle of arm tissue male embryo (97 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (97 days) output_type: peaks audit_warning: Alignment file {ENCFF100RAH|/files/ENCFF100RAH/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 27335468 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR649PJN | float |
DNase-seq_ENCSR649PJN |
DNase-seq ENCSR649PJN [biosample_summary="Homo sapiens muscle of arm tissue male embryo (97 days)"]
|
|
[0.257, 20.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF353AYR.bed.gz | 549.5 KB | cfc287e7529c60028a15abf76fcdc2a9 |
| ENCFF353AYR.bed.gz.dvc | 100.0 B | 57d1adf013b5453137950f04e841a75a |
| ENCFF353AYR.tabix.bed.gz | 488.84 KB | 01b22655eea073f32f3d8528e10eed05 |
| ENCFF353AYR.tabix.bed.gz.dvc | 106.0 B | a7db70a48c6159398b9ec4f82fee34d1 |
| ENCFF353AYR.tabix.bed.gz.tbi | 299.07 KB | 0464797efc0894cd2f4ef75033c2163e |
| ENCFF353AYR.tabix.bed.gz.tbi.dvc | 110.0 B | 9339843bd8ec64fa6428e037c42615e3 |
| genomic_resource.yaml | 1.83 KB | d679d5925ca19642335b2e5ae17deefe |
| genomic_resource_original.yaml | 1.73 KB | 482748c61c58046946455ca2fe184356 |
| statistics/ |