DNase-seq_ENCSR648GDP
DNase-seq ENCSR648GDP [biosample_summary="Homo sapiens fibroblast of skin of left biceps male embryo (97 days)"]
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| Id: | DNase-seq/ENCSR648GDP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR648GDP [biosample_summary="Homo sapiens fibroblast of skin of left biceps male embryo (97 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (97 days) output_type: peaks audit_warning: Alignment file {ENCFF149HFR|/files/ENCFF149HFR/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 29591508 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR648GDP | float |
DNase-seq_ENCSR648GDP |
DNase-seq ENCSR648GDP [biosample_summary="Homo sapiens fibroblast of skin of left biceps male embryo (97 days)"]
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[0.204, 51.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF251OYZ.bed.gz | 893.38 KB | b39d78fd81ffd1b9fe88a77d3fb89715 |
| ENCFF251OYZ.bed.gz.dvc | 100.0 B | 9bff80bffee5766e86a0bb7f2daa7efa |
| ENCFF251OYZ.tabix.bed.gz | 795.52 KB | 4ee9d404934f08ba18d4f2154157f163 |
| ENCFF251OYZ.tabix.bed.gz.dvc | 106.0 B | 4214c3d2c6b8c3e6cccfa3e043d720e8 |
| ENCFF251OYZ.tabix.bed.gz.tbi | 424.93 KB | 3b84e4a918f2f6f7f1215759e513b0d2 |
| ENCFF251OYZ.tabix.bed.gz.tbi.dvc | 110.0 B | 149e8b7f056ba0084315fb7f9e28091a |
| genomic_resource.yaml | 1.88 KB | dc015ca7efa152dd0f36692f73b17bc7 |
| genomic_resource_original.yaml | 1.77 KB | 1b02963bcd891d23d8367b274dfde2fa |
| statistics/ |