| Id: | DNase-seq/ENCSR642DZF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR642DZF [biosample_summary="Homo sapiens T-cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_internal_action: Released analysis {ENCAN445JVT|/analyses/ENCAN445JVT/} has in progress subobject document {e0a2fa89-7952-4313-8a5f-ce81138c32e6|/documents/e0a2fa89-7952-4313-8a5f-ce81138c32e6/} audit_internal_action: Released analysis {ENCAN445JVT|/analyses/ENCAN445JVT/} has in progress subobject document {b716a2b7-45e2-454c-ab37-2c1ce0e725db|/documents/b716a2b7-45e2-454c-ab37-2c1ce0e725db/} audit_warning: Alignment file {ENCFF608NVR|/files/ENCFF608NVR/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39470022 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR642DZF | float |
DNase-seq_ENCSR642DZF |
DNase-seq ENCSR642DZF [biosample_summary="Homo sapiens T-cell female adult (33 years)"]
|
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[0.229, 161] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF060XOT.bed.gz | 495.26 KB | cf4e114da91ec41c46d31f0b76be58a9 |
| ENCFF060XOT.bed.gz.dvc | 100.0 B | bfe81e6c82dcda4d2a8e1aba611ae87d |
| ENCFF060XOT.tabix.bed.gz | 447.86 KB | b6cb82f7d9a342f7a54e36b555619685 |
| ENCFF060XOT.tabix.bed.gz.dvc | 106.0 B | 62d4d8df0895d1ca57c3d26f77053b58 |
| ENCFF060XOT.tabix.bed.gz.tbi | 218.4 KB | 31e112e8c96744bbe874fd05f1d08c0a |
| ENCFF060XOT.tabix.bed.gz.tbi.dvc | 110.0 B | 2a14a68cb0a91a391423afe1a81ce42c |
| genomic_resource.yaml | 2.23 KB | ab64ec0ffca300e823200564eb2d7339 |
| genomic_resource_original.yaml | 2.13 KB | 8b80128dc068999423c8911564890680 |
| statistics/ |