DNase-seq_ENCSR639ZJI
DNase-seq ENCSR639ZJI [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)"]
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| Id: | DNase-seq/ENCSR639ZJI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR639ZJI [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (23 years) output_type: peaks audit_warning: Alignment file {ENCFF755WZY|/files/ENCFF755WZY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 23797863 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR639ZJI | float |
DNase-seq_ENCSR639ZJI |
DNase-seq ENCSR639ZJI [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)"]
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[0.295, 69.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF785BMM.bed.gz | 611.35 KB | ab99df17577a3a7017a8fef6393b33e6 |
| ENCFF785BMM.bed.gz.dvc | 100.0 B | c547cd3f0dc00dd28f085ee687f8cbf3 |
| ENCFF785BMM.tabix.bed.gz | 548.98 KB | 9149f9310009777e32615d75bf3ac7b0 |
| ENCFF785BMM.tabix.bed.gz.dvc | 106.0 B | cd2fa39cf703a95e016a380b1d8af463 |
| ENCFF785BMM.tabix.bed.gz.tbi | 314.19 KB | 902912e82a989f88d4b16ef652f7b5d2 |
| ENCFF785BMM.tabix.bed.gz.tbi.dvc | 110.0 B | 797deea69f9dcb1af544109a076f273a |
| genomic_resource.yaml | 1.9 KB | 5be56a62495234686dd23799415c8a51 |
| genomic_resource_original.yaml | 1.78 KB | 13c5e8cb1654da66605b21a660352789 |
| statistics/ |