Resource

Id DNase-seq/ENCSR639ZJIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR639ZJI [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)"]
Description
Labels
  • accession: ENCSR639ZJI
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)
  • date_created: 2015-09-16T21:42:08.680071+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR639ZJI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (23 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR639ZJI float

DNase-seq_ENCSR639ZJI
DNase-seq ENCSR639ZJI [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (23 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR639ZJI [0.295, 69.3]
n
10,141,863
mean
4.69
sd
5.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 101418630.32% 57285
chr1 956929 0.38% 5402
chr2 777073 0.32% 4441
chr3 660644 0.33% 3725
chr4 464642 0.24% 2664
chr5 515621 0.28% 2938
chr6 617107 0.36% 3499
chr7 516657 0.32% 2917
chr8 437090 0.30% 2482
chr9 405744 0.29% 2325
chr10 482961 0.36% 2776
chr11 490785 0.36% 2753
chr12 527594 0.40% 2989
chr13 252788 0.22% 1435
chr14 330280 0.31% 1870
chr15 327372 0.32% 1856
chr16 340314 0.38% 1890
chr17 466835 0.56% 2617
chr18 204829 0.25% 1181
chr19 485200 0.83% 2553
chr20 267374 0.41% 1530
chr21 119995 0.26% 681
chr22 199961 0.39% 1128
chrX 282956 0.18% 1571
chrY 11112 0.02% 62
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57285 12 680 177.04 180
global segment-length histogram

Files

Filename Size md5
ENCFF785BMM.bed.gz 611.35 KB ab99df17577a3a7017a8fef6393b33e6
ENCFF785BMM.tabix.bed.gz 548.98 KB 9149f9310009777e32615d75bf3ac7b0
ENCFF785BMM.tabix.bed.gz.tbi 314.19 KB 902912e82a989f88d4b16ef652f7b5d2
genomic_resource.yaml 1.9 KB 5be56a62495234686dd23799415c8a51
statistics/