DNase-seq_ENCSR639XWF
DNase-seq ENCSR639XWF [biosample_summary="Homo sapiens left lung tissue male embryo (96 days)"]
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| Id: | DNase-seq/ENCSR639XWF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR639XWF [biosample_summary="Homo sapiens left lung tissue male embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF949JDL|/files/ENCFF949JDL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 38658978 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR639XWF | float |
DNase-seq_ENCSR639XWF |
DNase-seq ENCSR639XWF [biosample_summary="Homo sapiens left lung tissue male embryo (96 days)"]
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[0.207, 22.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF342JXG.bed.gz | 652.0 KB | 9e6706f9b378e93db25607fea5de908f |
| ENCFF342JXG.bed.gz.dvc | 100.0 B | 56798c858232116c0ff9426c8d412f77 |
| ENCFF342JXG.tabix.bed.gz | 588.17 KB | aebacd766ae0b99dffdcda7a1edf9751 |
| ENCFF342JXG.tabix.bed.gz.dvc | 106.0 B | 63cbbefc16e19484387ca3f5a9e521e3 |
| ENCFF342JXG.tabix.bed.gz.tbi | 328.43 KB | 90ceba2aff0194b323c8262a665462a4 |
| ENCFF342JXG.tabix.bed.gz.tbi.dvc | 110.0 B | 3e0b95f672c3a137f1eea1b270f9d781 |
| genomic_resource.yaml | 1.82 KB | 5bac5344f23e60f18488af50066f9b44 |
| genomic_resource_original.yaml | 1.72 KB | 8aaa0ec2333ea414da7c33bf6138af9f |
| statistics/ |