Resource

Id DNase-seq/ENCSR625WLBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR625WLB [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)"]
Description
Labels
  • accession: ENCSR625WLB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000909/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)
  • date_created: 2020-04-11T19:51:03.124308+00:00
  • date_released: 2020-10-05
  • doi: 10.17989/ENCSR625WLB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (30 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR625WLB float

DNase-seq_ENCSR625WLB
DNase-seq ENCSR625WLB [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR625WLB [0.154, 54.6]
n
8,421,474
mean
6.13
sd
6.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 84214740.26% 44182
chr1 864851 0.35% 4522
chr2 568142 0.23% 2992
chr3 446366 0.23% 2354
chr4 282370 0.15% 1447
chr5 362141 0.20% 1908
chr6 484116 0.28% 2550
chr7 381863 0.24% 1994
chr8 298828 0.21% 1579
chr9 344618 0.25% 1823
chr10 372644 0.28% 1953
chr11 437328 0.32% 2308
chr12 444816 0.33% 2314
chr13 153598 0.13% 796
chr14 294607 0.28% 1530
chr15 265690 0.26% 1430
chr16 365525 0.40% 1903
chr17 529654 0.64% 2786
chr18 123254 0.15% 661
chr19 602531 1.03% 3058
chr20 245800 0.38% 1320
chr21 90886 0.19% 502
chr22 213434 0.42% 1145
chrX 239697 0.15% 1261
chrY 8715 0.02% 46
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44182 3 720 190.61 180
global segment-length histogram

Files

Filename Size md5
ENCFF375PHK.bed.gz 493.47 KB 43d2eaa6141d18db33e62af7ee53cfff
ENCFF375PHK.tabix.bed.gz 452.33 KB c13fe52cf768bc12bf2392ea65d8be46
ENCFF375PHK.tabix.bed.gz.tbi 205.91 KB 2deda5efc7ded356d170247a6f0fa0d8
genomic_resource.yaml 1.28 KB 8d6e78a2508e59c5b22631ad955a317b
statistics/