DNase-seq_ENCSR622CAH
DNase-seq ENCSR622CAH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (127 days)"]
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| Id: | DNase-seq/ENCSR622CAH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR622CAH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (127 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (127 days) output_type: peaks audit_warning: Alignment file {ENCFF056MLO|/files/ENCFF056MLO/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 25732125 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR622CAH | float |
DNase-seq_ENCSR622CAH |
DNase-seq ENCSR622CAH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (127 days)"]
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[0.273, 49] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF570VFR.bed.gz | 626.81 KB | df4bf75310179e79fcdc17467e439e7d |
| ENCFF570VFR.bed.gz.dvc | 100.0 B | fc09cc9ce6ee1527a82f340014fe317d |
| ENCFF570VFR.tabix.bed.gz | 557.68 KB | 6ed70827313981970afab0949523d1d0 |
| ENCFF570VFR.tabix.bed.gz.dvc | 106.0 B | 99796ad714f9620712f2679eecd181a5 |
| ENCFF570VFR.tabix.bed.gz.tbi | 319.8 KB | f02cd7569e6fb8bee04ecdb166b1f93e |
| ENCFF570VFR.tabix.bed.gz.tbi.dvc | 110.0 B | b27934ee676d7d61bea00dbc6d570b93 |
| genomic_resource.yaml | 1.84 KB | 40354b01d8a144c6a4c00af8b0317be7 |
| genomic_resource_original.yaml | 1.74 KB | f181737b6a66dd32d292f71e36d6a3ed |
| statistics/ |