DNase-seq_ENCSR606UAR
DNase-seq ENCSR606UAR [biosample_summary="Homo sapiens renal pelvis tissue female embryo (96 days)"]
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| Id: | DNase-seq/ENCSR606UAR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR606UAR [biosample_summary="Homo sapiens renal pelvis tissue female embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF593CAF|/files/ENCFF593CAF/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 38721208 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR606UAR | float |
DNase-seq_ENCSR606UAR |
DNase-seq ENCSR606UAR [biosample_summary="Homo sapiens renal pelvis tissue female embryo (96 days)"]
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[0.129, 21] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF425UTV.bed.gz | 711.28 KB | a48cc7974d5bc31bd71d9ee1a92188f4 |
| ENCFF425UTV.bed.gz.dvc | 100.0 B | 2f6f3296cfe90252cc6301871b479f44 |
| ENCFF425UTV.tabix.bed.gz | 638.1 KB | debd61a368acb146e88f62bf7d0d572d |
| ENCFF425UTV.tabix.bed.gz.dvc | 106.0 B | 025e15c2647a644f86f7b88f9d42be77 |
| ENCFF425UTV.tabix.bed.gz.tbi | 345.79 KB | 21a088db18e48ac17628655490fc9fd8 |
| ENCFF425UTV.tabix.bed.gz.tbi.dvc | 110.0 B | 2f1a757a0266d47aef21da741b488c21 |
| genomic_resource.yaml | 1.84 KB | 391a9f203da2dd87bc4757d3332b69a7 |
| genomic_resource_original.yaml | 1.74 KB | 921ff7f23054231865e06b13a28a37e6 |
| statistics/ |