DNase-seq_ENCSR594OWA
DNase-seq ENCSR594OWA [biosample_summary="Homo sapiens small intestine tissue male embryo (91 days)"]
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| Id: | DNase-seq/ENCSR594OWA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR594OWA [biosample_summary="Homo sapiens small intestine tissue male embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF768OXG|/files/ENCFF768OXG/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 21998088 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR594OWA | float |
DNase-seq_ENCSR594OWA |
DNase-seq ENCSR594OWA [biosample_summary="Homo sapiens small intestine tissue male embryo (91 days)"]
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[0.319, 17.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF478NDZ.bed.gz | 508.9 KB | 2e27acb15abcc5da3293f9d5454c710d |
| ENCFF478NDZ.bed.gz.dvc | 100.0 B | 222442529e32274fb4d26c6a8a7ff8e8 |
| ENCFF478NDZ.tabix.bed.gz | 446.12 KB | e7ddf367003d1be2802f0e81e16bcd5c |
| ENCFF478NDZ.tabix.bed.gz.dvc | 106.0 B | 8553fc012d4791be8a906a8255b2c332 |
| ENCFF478NDZ.tabix.bed.gz.tbi | 288.23 KB | 41ad45b7b967e39bb6484c1a487b626a |
| ENCFF478NDZ.tabix.bed.gz.tbi.dvc | 110.0 B | a36d46f2a8703909d0471b99a4d0a7ae |
| genomic_resource.yaml | 1.84 KB | 1eb7b3328f2d41543bd8049325c0a52c |
| genomic_resource_original.yaml | 1.74 KB | 91755a85bf90770fc6824ae6667e8e02 |
| statistics/ |