Resource

Id DNase-seq/ENCSR582MYCcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR582MYC [biosample_summary="Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)"]
Description
Labels
  • accession: ENCSR582MYC
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000913/
  • biosample_summary: Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)
  • date_created: 2021-08-23T23:11:18.573436+00:00
  • date_released: 2021-09-02
  • doi: 10.17989/ENCSR582MYC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (36 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR582MYC float

DNase-seq_ENCSR582MYC
DNase-seq ENCSR582MYC [biosample_summary="Homo sapiens effector memory CD8-positive, alpha-beta T cell male adult (36 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR582MYC [0.072, 45.1]
n
12,356,885
mean
3.43
sd
3.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 123568850.38% 55950
chr1 1247497 0.50% 5633
chr2 851090 0.35% 3881
chr3 675595 0.34% 3062
chr4 421287 0.22% 1906
chr5 554355 0.31% 2507
chr6 749960 0.44% 3358
chr7 566367 0.36% 2627
chr8 456541 0.31% 2127
chr9 483755 0.35% 2212
chr10 565375 0.42% 2541
chr11 637434 0.47% 2895
chr12 631052 0.47% 2818
chr13 248112 0.22% 1112
chr14 435580 0.41% 1975
chr15 404520 0.40% 1857
chr16 507322 0.56% 2273
chr17 740858 0.89% 3313
chr18 209464 0.26% 967
chr19 766667 1.31% 3377
chr20 356481 0.55% 1653
chr21 140904 0.30% 635
chr22 296150 0.58% 1357
chrX 386537 0.25% 1765
chrY 23982 0.04% 99
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55950 2 1080 220.86 200
global segment-length histogram

Files

Filename Size md5
ENCFF794YOT.bed.gz 618.28 KB a492c136b3357a4e61e4ac62791ffd33
ENCFF794YOT.tabix.bed.gz 570.44 KB 45d244a4eba7028b0d2f33ce00f8db84
ENCFF794YOT.tabix.bed.gz.tbi 250.25 KB ca8a8d49f8bb29f8c41fd74f8b7e7f50
genomic_resource.yaml 1.31 KB 586f9eb6d763ec04760d622651683afd
statistics/