DNase-seq_ENCSR572FSS
DNase-seq ENCSR572FSS [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR572FSS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR572FSS [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF340EAE|/files/ENCFF340EAE/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 31019146 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR572FSS | float |
DNase-seq_ENCSR572FSS |
DNase-seq ENCSR572FSS [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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[0.323, 48.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF507YCB.bed.gz | 388.33 KB | ea2f4c281e85d678ab67e8f93235cea2 |
| ENCFF507YCB.bed.gz.dvc | 100.0 B | 989a2c7a0a174ebbf52703e8137c180b |
| ENCFF507YCB.tabix.bed.gz | 352.45 KB | 874177fd907b3cac9c29bcb8f7bac95a |
| ENCFF507YCB.tabix.bed.gz.dvc | 106.0 B | 5d97f8b37bbc9103f704b08cb2793e1f |
| ENCFF507YCB.tabix.bed.gz.tbi | 189.95 KB | d2c3a0dc51f66b6571463d2631dbb8be |
| ENCFF507YCB.tabix.bed.gz.tbi.dvc | 110.0 B | e4eef5b3eda28c968fce231238f9920b |
| genomic_resource.yaml | 1.87 KB | 77ea2b926e4d7899c56bddf82d3d4f42 |
| genomic_resource_original.yaml | 1.76 KB | 762b890c317d54db3bc9443fbf70d96b |
| statistics/ |