Resource

Id DNase-seq/ENCSR537BGXcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR537BGX [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (61 years)"]
Description
Labels
  • accession: ENCSR537BGX
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue female adult (61 years)
  • date_created: 2019-09-12T18:22:18.362682+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR537BGX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR537BGX float

DNase-seq_ENCSR537BGX
DNase-seq ENCSR537BGX [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (61 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR537BGX [0.0402, 50.6]
n
62,063,989
mean
1.75
sd
2.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 620639891.93% 301182
chr1 5117971 2.06% 24632
chr2 4330108 1.79% 21635
chr3 2654033 1.34% 13536
chr4 2585910 1.36% 12591
chr5 2722136 1.50% 13544
chr6 2611296 1.53% 13283
chr7 3549107 2.23% 17079
chr8 2670169 1.84% 12935
chr9 3060235 2.21% 14602
chr10 2970999 2.22% 14742
chr11 3324379 2.46% 15735
chr12 2536746 1.90% 12553
chr13 1484061 1.30% 7337
chr14 2036841 1.90% 9679
chr15 1764883 1.73% 8981
chr16 3178628 3.52% 14691
chr17 3442328 4.13% 16523
chr18 1314107 1.64% 6550
chr19 3637385 6.21% 16589
chr20 2053196 3.19% 9718
chr21 1083680 2.32% 5145
chr22 2182372 4.29% 10231
chrX 1746828 1.12% 8822
chrY 6591 0.01% 49
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 301182 1 1120 206.07 200
global segment-length histogram

Files

Filename Size md5
ENCFF151SXP.bed.gz 3.09 MB 3255dcc298ea2a13e5fd79cc3203f58b
ENCFF151SXP.tabix.bed.gz 2.85 MB cf61dab0a8ff46ee9de96809d46a7351
ENCFF151SXP.tabix.bed.gz.tbi 669.51 KB 76d4a373de5c57028345524c19cbf64b
genomic_resource.yaml 1.26 KB b8bcd13d445e4113d941fe9abaea7e4f
statistics/