| Id: | DNase-seq/ENCSR531AYV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR531AYV [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (24 years) output_type: peaks audit_warning: Alignment file {ENCFF145NLF|/files/ENCFF145NLF/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39140288 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR531AYV | float |
DNase-seq_ENCSR531AYV |
DNase-seq ENCSR531AYV [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (24 years)"]
|
![]() |
[0.333, 64.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF937FLI.bed.gz | 381.92 KB | 30649672602044f5a5c241cbb96ef9ed |
| ENCFF937FLI.bed.gz.dvc | 100.0 B | cb42e0c5ecb48be83ac729b76fca5258 |
| ENCFF937FLI.tabix.bed.gz | 346.55 KB | 73ff229d098b5d81ed54061a3c5ee297 |
| ENCFF937FLI.tabix.bed.gz.dvc | 106.0 B | 7f2b0fe46996cb3ef5a73947514f68e1 |
| ENCFF937FLI.tabix.bed.gz.tbi | 181.05 KB | 217eb713ccdabe4fda81a85be51c8283 |
| ENCFF937FLI.tabix.bed.gz.tbi.dvc | 110.0 B | 0cf3035e27975e372195513e5b275a29 |
| genomic_resource.yaml | 1.93 KB | e7a836a07891ee8fa2c7abf1e833318c |
| genomic_resource_original.yaml | 1.8 KB | 0e93cea1132a36a9d642be19b0398c3b |
| statistics/ |