DNase-seq_ENCSR524DWS
DNase-seq ENCSR524DWS [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (120 days)"]
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| Id: | DNase-seq/ENCSR524DWS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR524DWS [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (120 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (120 days) output_type: peaks audit_warning: Alignment file {ENCFF442FFQ|/files/ENCFF442FFQ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 29400486 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR524DWS | float |
DNase-seq_ENCSR524DWS |
DNase-seq ENCSR524DWS [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (120 days)"]
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[0.239, 27.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF049BJU.bed.gz | 606.17 KB | 13051ad2c2705be033185068c83a4198 |
| ENCFF049BJU.bed.gz.dvc | 100.0 B | 26aca99b9f9c233004263545f8048bf8 |
| ENCFF049BJU.tabix.bed.gz | 537.71 KB | 4e46189be03fdcbdf26f3c02f77d956b |
| ENCFF049BJU.tabix.bed.gz.dvc | 106.0 B | 25ce68ae26ca5644658624120769f526 |
| ENCFF049BJU.tabix.bed.gz.tbi | 322.8 KB | 134ef8d0c65980c1f048aebcc4f5737e |
| ENCFF049BJU.tabix.bed.gz.tbi.dvc | 110.0 B | f730227983383dbeabf75fb431bbab12 |
| genomic_resource.yaml | 1.89 KB | 9a1f9e577d52af228327f8c82d54ab57 |
| genomic_resource_original.yaml | 1.77 KB | 94a94838eb9aff460402de72934b592d |
| statistics/ |