DNase-seq_ENCSR510ITB
DNase-seq ENCSR510ITB [biosample_summary="Homo sapiens left lung tissue male embryo (91 days)"]
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| Id: | DNase-seq/ENCSR510ITB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR510ITB [biosample_summary="Homo sapiens left lung tissue male embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (91 days) output_type: peaks audit_error: Alignment file {ENCFF626OFZ|/files/ENCFF626OFZ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 19680533 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR510ITB | float |
DNase-seq_ENCSR510ITB |
DNase-seq ENCSR510ITB [biosample_summary="Homo sapiens left lung tissue male embryo (91 days)"]
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[0.357, 41.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF750EJO.bed.gz | 583.59 KB | 025f9c1fd4e28a085761729a7db987ed |
| ENCFF750EJO.bed.gz.dvc | 100.0 B | ca531024cb8b353ae490a9130012b737 |
| ENCFF750EJO.tabix.bed.gz | 515.43 KB | 99be1c6a23e426f44ba1d42bf60c6214 |
| ENCFF750EJO.tabix.bed.gz.dvc | 106.0 B | c3b8d68105fc2f1750ac6a6befc76b98 |
| ENCFF750EJO.tabix.bed.gz.tbi | 326.57 KB | 90ab550857b5d85e9624d48d498c6a63 |
| ENCFF750EJO.tabix.bed.gz.tbi.dvc | 110.0 B | 0a1710f970e64753b3010cc2405efa5e |
| genomic_resource.yaml | 1.82 KB | 35cc07b899aded12a69fd9cf17231a32 |
| genomic_resource_original.yaml | 1.72 KB | 05bf221e1f4836aa2693759e44d5c50e |
| statistics/ |