DNase-seq_ENCSR495INQ
DNase-seq ENCSR495INQ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)"]
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| Id: | DNase-seq/ENCSR495INQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR495INQ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (42 years) output_type: peaks audit_warning: Alignment file {ENCFF582VTL|/files/ENCFF582VTL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 36847084 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR495INQ | float |
DNase-seq_ENCSR495INQ |
DNase-seq ENCSR495INQ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (42 years)"]
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[0.191, 53.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF646LUT.bed.gz | 769.9 KB | 6c23b204adcb7e0626b4b1d0272d33cd |
| ENCFF646LUT.bed.gz.dvc | 100.0 B | bd53f13a816e2123c14a03914cd96474 |
| ENCFF646LUT.tabix.bed.gz | 693.25 KB | 40cb0800e3f70c2338d4be584c1fba45 |
| ENCFF646LUT.tabix.bed.gz.dvc | 106.0 B | 60d8af340953bc803b120ee6f907c9d6 |
| ENCFF646LUT.tabix.bed.gz.tbi | 363.02 KB | c39505b9230ef4352138cc2a72178403 |
| ENCFF646LUT.tabix.bed.gz.tbi.dvc | 110.0 B | fe3d006ae766b6cd98f84da98c7df5c4 |
| genomic_resource.yaml | 1.9 KB | f7d45c0ac30296fab0cd58db5e694ea2 |
| genomic_resource_original.yaml | 1.78 KB | 85ed58195d4b0ae0b035f8b2c1a3e675 |
| statistics/ |