DNase-seq_ENCSR476SDZ
DNase-seq ENCSR476SDZ [biosample_summary="Homo sapiens muscle of back tissue male embryo (108 days)"]
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| Id: | DNase-seq/ENCSR476SDZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR476SDZ [biosample_summary="Homo sapiens muscle of back tissue male embryo (108 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (108 days) output_type: peaks audit_warning: Alignment file {ENCFF897GMR|/files/ENCFF897GMR/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30790795 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR476SDZ | float |
DNase-seq_ENCSR476SDZ |
DNase-seq ENCSR476SDZ [biosample_summary="Homo sapiens muscle of back tissue male embryo (108 days)"]
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[0.26, 22.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF186PHS.bed.gz | 581.68 KB | c86eddcb1e90d741ae2f6d505eb6a3ac |
| ENCFF186PHS.bed.gz.dvc | 100.0 B | 3fca31081bcaddce3df6961c79c48951 |
| ENCFF186PHS.tabix.bed.gz | 519.38 KB | ceaf552b224cda97df9b2698f54ab76f |
| ENCFF186PHS.tabix.bed.gz.dvc | 106.0 B | 57ec294d8c475c5c9897d9db1f6f7573 |
| ENCFF186PHS.tabix.bed.gz.tbi | 303.6 KB | 0172c168bc00b176b5049fd7e83f643f |
| ENCFF186PHS.tabix.bed.gz.tbi.dvc | 110.0 B | 5badfe130e0131b8d0e184d637a7bc02 |
| genomic_resource.yaml | 1.84 KB | 539b31e882dee51325b5eec0c36e9d5c |
| genomic_resource_original.yaml | 1.74 KB | 0fa4c653c255183e7e082ed31a39dba4 |
| statistics/ |