Resource

Id DNase-seq/ENCSR468OVWcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR468OVW [biosample_summary="Homo sapiens left lung tissue female embryo (105 days)"]
Description
Labels
  • accession: ENCSR468OVW
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female embryo (105 days)
  • date_created: 2015-09-16T21:42:54.515590+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR468OVW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR468OVW float

DNase-seq_ENCSR468OVW
DNase-seq ENCSR468OVW [biosample_summary="Homo sapiens left lung tissue female embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR468OVW [3, 3.51e+03]
n
14,138,353
mean
57.7
sd
68.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 141383530.44% 93877
chr1 1244279 0.50% 8253
chr2 1185917 0.49% 7865
chr3 961180 0.48% 6381
chr4 767374 0.40% 5098
chr5 822949 0.45% 5464
chr6 879231 0.51% 5839
chr7 745985 0.47% 4957
chr8 676730 0.47% 4488
chr9 590241 0.43% 3913
chr10 694623 0.52% 4614
chr11 716626 0.53% 4752
chr12 695624 0.52% 4621
chr13 422034 0.37% 2806
chr14 445884 0.42% 2958
chr15 436936 0.43% 2902
chr16 425419 0.47% 2829
chr17 532774 0.64% 3546
chr18 342610 0.43% 2281
chr19 424673 0.72% 2827
chr20 332471 0.52% 2212
chr21 168359 0.36% 1113
chr22 217827 0.43% 1449
chrX 407407 0.26% 2701
chrY 1200 <0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93877 8 450 150.61 150
global segment-length histogram

Files

Filename Size md5
ENCFF059HII.bed.gz 910.4 KB 0aac6f874b6f8646e15f0f0a39fda08f
ENCFF059HII.tabix.bed.gz 781.63 KB e536e4404b6631b08b27a5b28cfee4b0
ENCFF059HII.tabix.bed.gz.tbi 448.2 KB 6d64ffcdef2195c247717044e2ee36a1
genomic_resource.yaml 1.4 KB 0819289f6ba14f3d5b515772951a23e2
statistics/