DNase-seq_ENCSR468AKF
DNase-seq ENCSR468AKF [biosample_summary="Homo sapiens B cell male adult (22 years)"]
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| Id: | DNase-seq/ENCSR468AKF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR468AKF [biosample_summary="Homo sapiens B cell male adult (22 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (22 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF213FNG|/files/ENCFF213FNG/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.38. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR468AKF | float |
DNase-seq_ENCSR468AKF |
DNase-seq ENCSR468AKF [biosample_summary="Homo sapiens B cell male adult (22 years)"]
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[0.0508, 33.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF650BNV.bed.gz | 906.79 KB | bc6e2f152c3946d01f3d10e294b70c20 |
| ENCFF650BNV.bed.gz.dvc | 100.0 B | f70da66f9453c3c2958a86724381eec9 |
| ENCFF650BNV.tabix.bed.gz | 827.2 KB | 51c09e5b7deaa6e50bdcf8b474c2212f |
| ENCFF650BNV.tabix.bed.gz.dvc | 106.0 B | a7a595b915afb9e63b68039665627439 |
| ENCFF650BNV.tabix.bed.gz.tbi | 254.12 KB | 483f25e873c737d94dda1461f165a85a |
| ENCFF650BNV.tabix.bed.gz.tbi.dvc | 110.0 B | 063789170e009ee18aa4b27e4f1a07d0 |
| genomic_resource.yaml | 2.0 KB | bc22c65d383f13e3a2b16dc2333de8c1 |
| genomic_resource_original.yaml | 1.91 KB | 66fd4f68db2e9a262143a54a2a244624 |
| statistics/ |