DNase-seq_ENCSR457ILW
DNase-seq ENCSR457ILW [biosample_summary="Homo sapiens small intestine tissue female embryo (91 days)"]
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| Id: | DNase-seq/ENCSR457ILW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR457ILW [biosample_summary="Homo sapiens small intestine tissue female embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF635JQB|/files/ENCFF635JQB/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 21993127 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR457ILW | float |
DNase-seq_ENCSR457ILW |
DNase-seq ENCSR457ILW [biosample_summary="Homo sapiens small intestine tissue female embryo (91 days)"]
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[0.274, 15.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF759BPO.bed.gz | 403.03 KB | d325b1b500ef3189c23f3b2ebe07d678 |
| ENCFF759BPO.bed.gz.dvc | 100.0 B | 1f6f498f448bd32b36b65c6f7003086d |
| ENCFF759BPO.tabix.bed.gz | 359.14 KB | 944caa655c1c66d491c36cd3ebd85998 |
| ENCFF759BPO.tabix.bed.gz.dvc | 106.0 B | edaa1a678fc57f8a67ee3cba51a6be26 |
| ENCFF759BPO.tabix.bed.gz.tbi | 220.93 KB | 1735468ec9636dc1d48d937f9b23b55f |
| ENCFF759BPO.tabix.bed.gz.tbi.dvc | 110.0 B | c7ec55809bbdc8313815c26e1ffd8b04 |
| genomic_resource.yaml | 1.85 KB | 01983f8345f68a2e783725d78bfe627e |
| genomic_resource_original.yaml | 1.74 KB | 63429035436faac03439cc99db7fa399 |
| statistics/ |