DNase-seq_ENCSR453EVC
DNase-seq ENCSR453EVC [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)"]
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| Id: | DNase-seq/ENCSR453EVC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR453EVC [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (36 years) output_type: peaks audit_warning: Alignment file {ENCFF569GII|/files/ENCFF569GII/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30293901 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR453EVC | float |
DNase-seq_ENCSR453EVC |
DNase-seq ENCSR453EVC [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)"]
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[0.266, 63.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF734TMQ.bed.gz | 700.35 KB | 5014ca0e69a47d5f41f721954a2fcfb9 |
| ENCFF734TMQ.bed.gz.dvc | 100.0 B | 4494f3a0f101cf97c59b0eae564bbed8 |
| ENCFF734TMQ.tabix.bed.gz | 626.94 KB | ac58b9832fbb519dd6590b48cdc19691 |
| ENCFF734TMQ.tabix.bed.gz.dvc | 106.0 B | 551dea909887d91e41e6ace3ec1b2f0d |
| ENCFF734TMQ.tabix.bed.gz.tbi | 341.66 KB | 424c6d6358024aa219ef99b2bf25e706 |
| ENCFF734TMQ.tabix.bed.gz.tbi.dvc | 110.0 B | 9889f13b70d0c58e378b1b7be6cf2f61 |
| genomic_resource.yaml | 1.9 KB | 2e3ae79d23a653aee850fdd5722f2f54 |
| genomic_resource_original.yaml | 1.78 KB | b5b205f4625342af8c667396227fa2d4 |
| statistics/ |