Resource

Id DNase-seq/ENCSR452DCMcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR452DCM [biosample_summary="Homo sapiens CD14-positive monocyte male adult (21 years)"]
Description
Labels
  • accession: ENCSR452DCM
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte male adult (21 years)
  • date_created: 2015-09-16T21:42:11.239241+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR452DCM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR452DCM float

DNase-seq_ENCSR452DCM

DNase-seq ENCSR452DCM [biosample_summary="Homo sapiens CD14-positive monocyte male adult (21 years)"]
HISTOGRAM FOR DNase-seq_ENCSR452DCM [0.0175, 51.9]
n
28,004,503
mean
2.76
sd
4.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 280045030.87% 150187
chr1 2722589 1.09% 14572
chr2 2153857 0.89% 11625
chr3 1761718 0.89% 9472
chr4 1144006 0.60% 6197
chr5 1422822 0.78% 7678
chr6 1703779 1.00% 9147
chr7 1296189 0.81% 7021
chr8 1231104 0.85% 6643
chr9 1159143 0.84% 6254
chr10 1357662 1.01% 7285
chr11 1433703 1.06% 7630
chr12 1433205 1.08% 7731
chr13 596711 0.52% 3234
chr14 905640 0.85% 4790
chr15 933135 0.91% 5059
chr16 947842 1.05% 5085
chr17 1430108 1.72% 7581
chr18 526687 0.66% 2886
chr19 1238216 2.11% 6328
chr20 794854 1.23% 4274
chr21 350346 0.75% 1870
chr22 575026 1.13% 3066
chrX 853697 0.55% 4580
chrY 32464 0.06% 179
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 150187 3 1240 186.46 180
global segment-length histogram

Files

Filename Size md5
ENCFF229GYW.bed.gz 1.66 MB 46ab26b019d12fa4960caf4ee1109792
ENCFF229GYW.tabix.bed.gz 1.51 MB 11fc6c65cffeab7545da6d367ded7f0e
ENCFF229GYW.tabix.bed.gz.tbi 436.92 KB 1a9f7ba6e8a87ce2e135ddada14c93b7
genomic_resource.yaml 1.23 KB f04e814b96c13be9e8c61bfd896ae5d7
statistics/