DNase-seq_ENCSR441OGH
DNase-seq ENCSR441OGH [biosample_summary="Homo sapiens left lung tissue male embryo (87 days)"]
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| Id: | DNase-seq/ENCSR441OGH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR441OGH [biosample_summary="Homo sapiens left lung tissue male embryo (87 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (87 days) output_type: peaks audit_warning: Alignment file {ENCFF383TDA|/files/ENCFF383TDA/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 49572190 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR441OGH | float |
DNase-seq_ENCSR441OGH |
DNase-seq ENCSR441OGH [biosample_summary="Homo sapiens left lung tissue male embryo (87 days)"]
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[0.101, 69.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF876RDL.bed.gz | 1.09 MB | 9a5ab9847ddeaabc2a2f79c1080024fe |
| ENCFF876RDL.bed.gz.dvc | 101.0 B | e930361494c8f9071e2fda8f78f5d791 |
| ENCFF876RDL.tabix.bed.gz | 1000.37 KB | 37ddb139940be69aac70181952f1f245 |
| ENCFF876RDL.tabix.bed.gz.dvc | 107.0 B | f97337dab73fd2a1a9ade99416655fc6 |
| ENCFF876RDL.tabix.bed.gz.tbi | 481.1 KB | b71ce7a2a6d25fd00b596dfda90e1bbd |
| ENCFF876RDL.tabix.bed.gz.tbi.dvc | 110.0 B | 755d7f13c81517d74a412c30aa5fa63b |
| genomic_resource.yaml | 1.82 KB | faf6a48c0efc8d54b39665dbeb813c74 |
| genomic_resource_original.yaml | 1.72 KB | 3ba281f0b98769e6ee378a3dcce0f5fe |
| statistics/ |