Resource

Id	DNase-seq/ENCSR440BPAcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR440BPA [biosample_summary="Homo sapiens with Cognitive impairment, Alzheimer''s disease; head of caudate nucleus tissue female adult (87 years)"]
Description
Labels	accession: ENCSR440BPA assay_term_name: DNase-seq biosample_ontology: /biosample-types/tissue_UBERON_0002626/ biosample_summary: Homo sapiens with Cognitive impairment, Alzheimer's disease; head of caudate nucleus tissue female adult (87 years) date_created: 2020-05-28T00:56:22.430193+00:00 date_released: 2020-09-28 doi: 10.17989/ENCSR440BPA perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: unreplicated simple_biosample_summary: female adult (87 years) with Cognitive impairment, Alzheimer's disease status: released submitter_comment:

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR440BPA	float	DNase-seq_ENCSR440BPA	DNase-seq ENCSR440BPA [biosample_summary="Homo sapiens with Cognitive impairment, Alzheimer''s disease; head of caudate nucleus tissue female adult (87 years)"]		[0.0762, 39.5]	n 15,932,796 mean 2.23 sd 3.15

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	15932796	0.50%	89004
chr1	1435851	0.58%	7998
chr2	1204425	0.50%	6796
chr3	744344	0.38%	4197
chr4	543215	0.29%	3027
chr5	731588	0.40%	4103
chr6	705795	0.41%	3964
chr7	803784	0.50%	4515
chr8	677972	0.47%	3826
chr9	755016	0.55%	4244
chr10	856832	0.64%	4804
chr11	986608	0.73%	5455
chr12	664040	0.50%	3710
chr13	307853	0.27%	1725
chr14	563899	0.53%	3188
chr15	496128	0.49%	2823
chr16	701495	0.78%	3885
chr17	905625	1.09%	5010
chr18	261975	0.33%	1506
chr19	805615	1.37%	4291
chr20	471382	0.73%	2658
chr21	275958	0.59%	1537
chr22	722237	1.42%	4015
chrX	310372	0.20%	1719
chrY	787	<0.01%	8
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	89004	1	900	179.01	180