Resource

Id DNase-seq/ENCSR407WGGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR407WGG [biosample_summary="Homo sapiens natural killer cell female adult (41 years)"]
Description
Labels
  • accession: ENCSR407WGG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell female adult (41 years)
  • date_created: 2021-08-31T15:47:27.282007+00:00
  • date_released: 2021-09-10
  • doi: 10.17989/ENCSR407WGG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR407WGG float

DNase-seq_ENCSR407WGG
DNase-seq ENCSR407WGG [biosample_summary="Homo sapiens natural killer cell female adult (41 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR407WGG [0.0651, 25.5]
n
10,078,030
mean
2.59
sd
2.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 100780300.31% 50654
chr1 1044274 0.42% 5186
chr2 708048 0.29% 3566
chr3 527129 0.27% 2672
chr4 346865 0.18% 1743
chr5 452147 0.25% 2278
chr6 565063 0.33% 2820
chr7 473897 0.30% 2400
chr8 374614 0.26% 1933
chr9 404815 0.29% 2048
chr10 457283 0.34% 2314
chr11 510708 0.38% 2596
chr12 488617 0.37% 2470
chr13 191027 0.17% 946
chr14 360434 0.34% 1800
chr15 336292 0.33% 1733
chr16 401086 0.44% 2010
chr17 628072 0.75% 3083
chr18 167609 0.21% 865
chr19 672785 1.15% 3282
chr20 286034 0.44% 1450
chr21 114973 0.25% 596
chr22 271521 0.53% 1353
chrX 294604 0.19% 1509
chrY 133 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50654 1 1280 198.96 180
global segment-length histogram

Files

Filename Size md5
ENCFF965NLE.bed.gz 562.94 KB 5c24f9364fdaa06779bbec65e8030189
ENCFF965NLE.tabix.bed.gz 520.81 KB 2c57d68589b13ddd3cfbe61f1570570c
ENCFF965NLE.tabix.bed.gz.tbi 234.26 KB 6e68f7bd18781ee15836c1ae3543df00
genomic_resource.yaml 2.04 KB 8b28eee9307ce45e19d6f0918ab68121
statistics/