Resource

Id	DNase-seq/ENCSR400MOPcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR400MOP [biosample_summary="Homo sapiens with Alzheimer''s disease; head of caudate nucleus tissue male adult (90 or above years)"]
Description
Labels	accession: ENCSR400MOP assay_term_name: DNase-seq biosample_ontology: /biosample-types/tissue_UBERON_0002626/ biosample_summary: Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue male adult (90 or above years) date_created: 2021-04-01T15:48:57.922164+00:00 date_released: 2021-06-17 doi: 10.17989/ENCSR400MOP perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: unreplicated simple_biosample_summary: male adult (90 or above years) with Alzheimer's disease status: released submitter_comment:

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR400MOP	float	DNase-seq_ENCSR400MOP	DNase-seq ENCSR400MOP [biosample_summary="Homo sapiens with Alzheimer''s disease; head of caudate nucleus tissue male adult (90 or above years)"]		[0.061, 33.4]	n 17,904,365 mean 2.66 sd 3.3

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	17904365	0.56%	98475
chr1	1739278	0.70%	9491
chr2	1330919	0.55%	7433
chr3	1060249	0.53%	5861
chr4	713496	0.38%	3950
chr5	898344	0.49%	4969
chr6	948484	0.56%	5224
chr7	880146	0.55%	4874
chr8	769270	0.53%	4279
chr9	795601	0.57%	4363
chr10	840805	0.63%	4661
chr11	982825	0.73%	5377
chr12	874040	0.66%	4775
chr13	393711	0.34%	2216
chr14	590832	0.55%	3242
chr15	602734	0.59%	3329
chr16	705779	0.78%	3870
chr17	914012	1.10%	4963
chr18	347471	0.43%	1943
chr19	878009	1.50%	4588
chr20	536788	0.83%	2973
chr21	199580	0.43%	1119
chr22	406218	0.80%	2221
chrX	476731	0.31%	2649
chrY	19043	0.03%	105
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	98475	1	840	181.82	180