Resource

Id DNase-seq/ENCSR395HAEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR395HAE [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR395HAE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (59 years)
  • date_created: 2019-11-01T19:05:04.016552+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR395HAE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR395HAE float

DNase-seq_ENCSR395HAE
DNase-seq ENCSR395HAE [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR395HAE [0.0373, 39]
n
23,650,541
mean
2.31
sd
3.47

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 236505410.74% 129102
chr1 2196582 0.88% 11938
chr2 1758093 0.73% 9678
chr3 1282318 0.65% 7078
chr4 913041 0.48% 5052
chr5 1121849 0.62% 6297
chr6 1001045 0.59% 5648
chr7 1185865 0.74% 6485
chr8 1063410 0.73% 5845
chr9 1089184 0.79% 5928
chr10 1214354 0.91% 6675
chr11 1388103 1.03% 7413
chr12 1034690 0.78% 5708
chr13 475507 0.42% 2644
chr14 798848 0.75% 4287
chr15 747533 0.73% 4145
chr16 998883 1.11% 5430
chr17 1432518 1.72% 7646
chr18 406116 0.51% 2278
chr19 1126020 1.92% 5816
chr20 786428 1.22% 4291
chr21 415928 0.89% 2227
chr22 746150 1.47% 3989
chrX 466760 0.30% 2592
chrY 1316 <0.01% 12
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129102 3 900 183.19 180
global segment-length histogram

Files

Filename Size md5
ENCFF282JHC.bed.gz 1.37 MB 0497de6b035e8b94c6894849bc3c3760
ENCFF282JHC.tabix.bed.gz 1.25 MB ecfad95ae0195ad6baf9faed40664eaf
ENCFF282JHC.tabix.bed.gz.tbi 376.07 KB efc5ccd1587fc4b04204cc13591c9f0e
genomic_resource.yaml 1.25 KB b6b2fe7b6c5d63845efe5e78b13a5a95
statistics/