Resource

Id DNase-seq/ENCSR382JUJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR382JUJ [biosample_summary="Homo sapiens superior temporal gyrus tissue male adult (84 years)"]
Description
Labels
  • accession: ENCSR382JUJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002769/
  • biosample_summary: Homo sapiens superior temporal gyrus tissue male adult (84 years)
  • date_created: 2015-03-28T06:18:38.478404+00:00
  • date_released: 2016-05-09
  • doi: 10.17989/ENCSR382JUJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (84 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR382JUJ float

DNase-seq_ENCSR382JUJ
DNase-seq ENCSR382JUJ [biosample_summary="Homo sapiens superior temporal gyrus tissue male adult (84 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR382JUJ [1, 149]
n
44,637,640
mean
64.1
sd
24.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 446376401.39% 330018
chr1 4187650 1.68% 30762
chr2 3667510 1.51% 27234
chr3 3027680 1.53% 22477
chr4 2243580 1.18% 16675
chr5 2631210 1.45% 19517
chr6 2757460 1.61% 20467
chr7 2341490 1.47% 17561
chr8 2100510 1.45% 15598
chr9 1965600 1.42% 14614
chr10 2118600 1.58% 15564
chr11 2320040 1.72% 17025
chr12 2209070 1.66% 16335
chr13 1286760 1.13% 9573
chr14 1518450 1.42% 11163
chr15 1400170 1.37% 10324
chr16 1368410 1.51% 10082
chr17 1751950 2.10% 12819
chr18 1027360 1.28% 7627
chr19 1212370 2.07% 8734
chr20 1104940 1.71% 8087
chr21 574590 1.23% 4365
chr22 739600 1.46% 5390
chrX 1021110 0.65% 7533
chrY 61530 0.11% 492
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 330018 10 410 135.26 150
global segment-length histogram

Files

Filename Size md5
ENCFF964VEP.bed.gz 2.65 MB f9edaada3c1eb6c2d4bca37ad481b026
ENCFF964VEP.tabix.bed.gz 2.51 MB 362db1c400f0a03bf9b63a268c2d9d24
ENCFF964VEP.tabix.bed.gz.tbi 672.27 KB a63d1654a0c977be5164e4e807f08018
genomic_resource.yaml 1.25 KB 9eaadefb2ca40a05cb68dcedeb85c3b0
statistics/