Resource

Id DNase-seq/ENCSR381PXWcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR381PXW [biosample_summary="Homo sapiens B cell male adult (21 years)"]
Description
Labels
  • accession: ENCSR381PXW
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell male adult (21 years)
  • date_created: 2015-09-16T21:42:02.038794+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR381PXW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR381PXW float

DNase-seq_ENCSR381PXW

DNase-seq ENCSR381PXW [biosample_summary="Homo sapiens B cell male adult (21 years)"]
HISTOGRAM FOR DNase-seq_ENCSR381PXW [6, 6.76e+04]
n
29,319,372
mean
561
sd
1.33e+03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 293193720.91% 194835
chr1 2743175 1.10% 18236
chr2 2264491 0.93% 15045
chr3 1724381 0.87% 11462
chr4 1327497 0.70% 8812
chr5 1466812 0.81% 9745
chr6 1767736 1.03% 11759
chr7 1470787 0.92% 9776
chr8 1249415 0.86% 8293
chr9 1237868 0.89% 8225
chr10 1293607 0.97% 8602
chr11 1453684 1.08% 9651
chr12 1448764 1.09% 9625
chr13 721835 0.63% 4788
chr14 952884 0.89% 6341
chr15 890135 0.87% 5913
chr16 1026063 1.14% 6819
chr17 1427617 1.71% 9493
chr18 582155 0.72% 3868
chr19 1442593 2.46% 9596
chr20 769519 1.19% 5113
chr21 335045 0.72% 2228
chr22 647228 1.27% 4306
chrX 993155 0.64% 6588
chrY 82926 0.14% 551
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 194835 1 450 150.48 150
global segment-length histogram

Files

Filename Size md5
ENCFF698QNG.bed.gz 1.89 MB 82ec4903838c3476880b6fc1924b8c35
ENCFF698QNG.tabix.bed.gz 1.62 MB 55245a326cede1f7cb48c9344ae81980
ENCFF698QNG.tabix.bed.gz.tbi 556.95 KB 87b324f9219fbb04593f3d5451f71552
genomic_resource.yaml 1.36 KB 83c99b6fa10a83c2091e6f19741174e0
statistics/