DNase-seq_ENCSR371KRY
DNase-seq ENCSR371KRY [biosample_summary="Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)"]
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| Id: | DNase-seq/ENCSR371KRY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR371KRY [biosample_summary="Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (97 days) output_type: peaks audit_warning: Alignment file {ENCFF252KSN|/files/ENCFF252KSN/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 42848445 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR371KRY | float |
DNase-seq_ENCSR371KRY |
DNase-seq ENCSR371KRY [biosample_summary="Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)"]
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[0.164, 46.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF353GBN.bed.gz | 1.11 MB | 68f369aad8b16a17e7284cac50fab030 |
| ENCFF353GBN.bed.gz.dvc | 101.0 B | 19a9cc3474c5e525b9222fc6bdc9856f |
| ENCFF353GBN.tabix.bed.gz | 1021.09 KB | c1e5f0e4a775951f70b82a146fb06b58 |
| ENCFF353GBN.tabix.bed.gz.dvc | 107.0 B | 77f1272665f068b49fe13efdd0fbb118 |
| ENCFF353GBN.tabix.bed.gz.tbi | 491.03 KB | 346ab9ddbf13ddb98eb5159b707be4d9 |
| ENCFF353GBN.tabix.bed.gz.tbi.dvc | 110.0 B | 48cd41b5b46327935bb4a1eae55cb3b8 |
| genomic_resource.yaml | 1.89 KB | b4f36a0a696b5d9b1ad88c4415c91746 |
| genomic_resource_original.yaml | 1.77 KB | 97a0e1ebce1e76daac6e628c8494a450 |
| statistics/ |