Resource
| Id | DNase-seq/ENCSR366NBE |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR366NBE [biosample_summary="Homo sapiens Calu3"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR366NBE | float |
DNase-seq_ENCSR366NBE |
DNase-seq ENCSR366NBE [biosample_summary="Homo sapiens Calu3"]
|
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[0.0718, 585] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 21929025 | 0.68% | 117132 |
| chr1 | 2155974 | 0.87% | 11447 |
| chr2 | 1687915 | 0.70% | 9117 |
| chr3 | 1465721 | 0.74% | 7880 |
| chr4 | 893984 | 0.47% | 4950 |
| chr5 | 1193879 | 0.66% | 6408 |
| chr6 | 1328381 | 0.78% | 7076 |
| chr7 | 1135091 | 0.71% | 6050 |
| chr8 | 972947 | 0.67% | 5203 |
| chr9 | 796870 | 0.58% | 4311 |
| chr10 | 993447 | 0.74% | 5357 |
| chr11 | 1055463 | 0.78% | 5638 |
| chr12 | 1102427 | 0.83% | 5896 |
| chr13 | 376344 | 0.33% | 2106 |
| chr14 | 696814 | 0.65% | 3708 |
| chr15 | 707699 | 0.69% | 3725 |
| chr16 | 824102 | 0.91% | 4322 |
| chr17 | 1179079 | 1.42% | 6028 |
| chr18 | 465768 | 0.58% | 2538 |
| chr19 | 937634 | 1.60% | 4838 |
| chr20 | 627748 | 0.97% | 3357 |
| chr21 | 221579 | 0.47% | 1206 |
| chr22 | 464602 | 0.91% | 2460 |
| chrX | 645417 | 0.41% | 3510 |
| chrY | 140 | <0.01% | 1 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 117132 | 1 | 880 | 187.22 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF930GWQ.bed.gz | 1.26 MB | 2711d54f3b0dc2acb13fa649cf618424 |
| ENCFF930GWQ.tabix.bed.gz | 1.15 MB | 81ac96a06139056da5e857478204681f |
| ENCFF930GWQ.tabix.bed.gz.tbi | 458.98 KB | 3e9e2395f4ad7cd0013881d8009c0485 |
| genomic_resource.yaml | 1.06 KB | 05dc0c6885e3a6c51852c8309ae02b66 |
| statistics/ |
