DNase-seq_ENCSR366KPR
DNase-seq ENCSR366KPR [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR366KPR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR366KPR [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF292CZL|/files/ENCFF292CZL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 41187814 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR366KPR | float |
DNase-seq_ENCSR366KPR |
DNase-seq ENCSR366KPR [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (38 years)"]
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[0.243, 75.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF286LXY.bed.gz | 482.82 KB | a2c80311ca8b470e8b362afe51646b42 |
| ENCFF286LXY.bed.gz.dvc | 100.0 B | a9ea5b2d6ea07d72f50f26d41280c3c9 |
| ENCFF286LXY.tabix.bed.gz | 438.75 KB | 0826536557c87e03ac0bae5798d6c58a |
| ENCFF286LXY.tabix.bed.gz.dvc | 106.0 B | b192dde3f160ddf85785856535f5a074 |
| ENCFF286LXY.tabix.bed.gz.tbi | 213.36 KB | 035fb69f81cdea58b72260147e92b177 |
| ENCFF286LXY.tabix.bed.gz.tbi.dvc | 110.0 B | 78baec098d81b91b3603324410913b1e |
| genomic_resource.yaml | 1.87 KB | 92cdad2d451f0173852ec4fcacf83f83 |
| genomic_resource_original.yaml | 1.76 KB | 7d495c12351296e426d08df3d5e16f7c |
| statistics/ |